BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B06SP1|AL428497
(833 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1787 876 0.0
>3x_Contig1787
Length = 34189
Score = 876 bits (433), Expect = 0.0
Identities = 460/474 (97%)
Strand = Plus / Plus
Query: 1 gatcaagctgcagctggtttatctataaagctaactaatcaattaaattctcttaggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19599 gatcaagctgcagctggtttatctataaagctaactaatcaattaaattctcttaggggc 19658
Query: 61 ttgcaaagaaaattgaaagacatagtagcatacttggaaaaagtggcaaacaacgagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19659 ttgcaaagaaaattgaaagacatagtagcatacttggaaaaagtggcaaacaacgagtta 19718
Query: 121 cctgtgaaccacataattttaggaaaattgcaagacattttcaatcttcttccaaacctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19719 cctgtgaaccacataattttaggaaaattgcaagacattttcaatcttcttccaaacctc 19778
Query: 181 ggaaccccagataaagatgaaatgatcggctcaagtcatgtcttagacaatgttaccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19779 ggaaccccagataaagatgaaatgatcggctcaagtcatgtcttagacaatgttaccaac 19838
Query: 241 aatttggaaaaagccctcacagttaaaaccaatgacgaactaatgatcatttacatwagt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 19839 aatttggaaaaagccctcacagttaaaaccaatgacgaactaatgatcatttacataagt 19898
Query: 301 yatctggtcagagccatagttgcatttgataacttgattgagaacaaaattcaaaatwag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 19899 aatctggtcagagccatagttgcatttgataacttgattgagaacaaaattcaaaataag 19958
Query: 361 anacttcttgadaagcattcganagttgaagtagaacaawaggnggatgccactdatgac 420
| ||||||||| |||||||||| |||||||||||||||| ||| |||||||||| |||||
Sbjct: 19959 aaacttcttgaaaagcattcgaaagttgaagtagaacaaaaggaggatgccactaatgac 20018
Query: 421 ggcatccctgctgagtcgtattcggtacctactaagakctgntgcgnctctttt 474
|||||||||||||||||| |||||||||||||||||| ||| ||| |||||||
Sbjct: 20019 ggcatccctgctgagtcgaattcggtacctactaagaactgatgcaactctttt 20072
Score = 475 bits (235), Expect = e-134
Identities = 249/262 (95%)
Strand = Plus / Plus
Query: 572 gcagtatgtatgtctatatctmagatcagcaccattggcatcgatatggractgatcaat 631
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 20170 gcagtatgtatgtctatatctaagatcagcaccattggcatcgatatggaactgatcaat 20229
Query: 632 gaattahatggmtctccggtaccggttcgttagttctcgtcaacctcttcagattgattc 691
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20230 gaattaaatggatctccggtaccggttcgttagttctcgtcaacctcttcagattgattc 20289
Query: 692 cttctaatatatcamattcgcatctcttcatataagrnmwtttthtgaagattaaagatc 751
|||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 20290 cttctaatatatcaaattcgcatctcttcatataagaaaattttatgaagattaaagatc 20349
Query: 752 grggraattgttcattgcgcacaattttgaaggtaaaaaccattctgagacaacagtgta 811
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20350 gaggaaattgttcattgcgcacaattttgaaggtaaaaaccattctgagacaacagtgta 20409
Query: 812 tttwccagaccgaggcccagtt 833
||| ||||||||||||||||||
Sbjct: 20410 tttaccagaccgaggcccagtt 20431
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5701
Number of Sequences: 1807
Number of extensions: 5701
Number of successful extensions: 142
Number of sequences better than 1.0e-20: 1
length of query: 833
length of database: 10,358,551
effective HSP length: 16
effective length of query: 817
effective length of database: 10,329,639
effective search space: 8439315063
effective search space used: 8439315063
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)